BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015D09SP1|AL426842
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1007 886 0.0
3x_Contig868 706 0.0
>3x_Contig1007
Length = 3570
Score = 886 bits (444), Expect = 0.0
Identities = 458/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 1 gacccgataacggtgaaggctaacgagaagaagcgagtbgcatacttttatgatgctgat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 466 gacccgataacggtgaaggctaacgagaagaagcgagttgcatacttttatgatgctgat 407
Query: 61 gtgggaaactatgcttatggtgcaggacatcctatgavaccacatagaataagaatgaca 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 406 gtgggaaactatgcttatggtgcaggacatcctatgaaaccacatagaataagaatgaca 347
Query: 121 cattcgttgattatgaattacggtttgtataagaagatggaaatttacagggctaaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cattcgttgattatgaattacggtttgtataagaagatggaaatttacagggctaaacct 287
Query: 181 gcaacgaaacaggagatgtgtcagtyccataccgatgaatatattgatttcttgtctcga 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 286 gcaacgaaacaggagatgtgtcagttccataccgatgaatatattgatttcttgtctcga 227
Query: 241 gtcactccagataatttagatatgttccaaaaggagagtgtgaaattcaacgttggagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gtcactccagataatttagatatgttccaaaaggagagtgtgaaattcaacgttggagac 167
Query: 301 gattgtcctgtgtttgatggtttgtacgagtactgtagtatatctggvggtggttctatg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 166 gattgtcctgtgtttgatggtttgtacgagtactgtagtatatctggaggtggttctatg 107
Query: 361 gagggtgcagccagattaamccgaggcaaatgtgatgttgc-cattaactatgctggtgg 419
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 106 gagggtgcagccagattaaaccgaggcaaatgtgatgttgcacattaactatgctggtgg 47
Query: 420 tttacatcatgccaaavmatcggaagcttcagggttctgttacttg 465
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 46 tttacatcatgccaaaaaatcggaagcttcagggttctgttacttg 1
>3x_Contig868
Length = 3693
Score = 706 bits (354), Expect = 0.0
Identities = 375/381 (98%), Gaps = 2/381 (0%)
Strand = Plus / Minus
Query: 598 ttccataaatatggggaattcttcccaggtactgntgaattgagagatactggtgtcggg 657
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3693 ttccataaatatggggaattcttcccaggtactggtgaattgagagatactggtgtcggg 3634
Query: 658 aaaggtaaatactatgctgtgaatgtcccattaagggacggtattgacgatgccacttac 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3633 aaaggtaaatactatgctgtgaatgtcccattaagggacggtattgacgatgccacttac 3574
Query: 718 aaatcggtatttgaaccagtcataggtaaaattatggaatggtaccaaccttctgccgtg 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3573 aaatcggtatttgaaccagtcataggtaaaattatggaatggtaccaaccttctgccgtg 3514
Query: 778 gtactccaatgcggtggtgactctttatccggcgatcgtttaggttgtttcaacytttca 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3513 gtactccaatgcggtggtgactctttatccggcgatcgtttaggttgtttcaacctttca 3454
Query: 838 atgaagggtcacgcaaactgtgtc-actacatgaratcgttcggtgttcctctcatgatt 896
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 3453 atgaagggtcacgcaaactgtgtcaactacatgaaatcgttcggtgttcctctcatgatt 3394
Query: 897 gttggtggtggtggttatacaatgcgaaacgtggctcgtacatgggctttckgagacggg 956
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 3393 gttggtggtggtggttatacaatgcgaaacgtggctcgtacatgggctttc-gaaacggg 3335
Query: 957 tattctgaataatgtgatttt 977
|||||||||||||||||||||
Sbjct: 3334 tattctgaataatgtgatttt 3314
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5716
Number of Sequences: 1807
Number of extensions: 5716
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 2
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)